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Identifier
N

Gene
N
Protein name
Nucleoprotein
Localization
cell - cytoplasm, virus - capsid
Uniprot
P0DTC9
Description

Packages the positive strand viral genome RNA into a helical ribonucleocapsid (RNP) and plays a fundamental role during virion assembly through its interactions with the viral genome and membrane protein M. Plays an important role in enhancing the efficiency of subgenomic viral RNA transcription as well as viral replication. May modulate transforming growth factor-beta signaling by binding host smad3. (From UniProt)

Information & downloads

Downloads

These downloads are specific to this bait. Full data set downloads can be found on the downloads page.

Sequence

MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA
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Visualization

Specificity

Plot the specificity of a prey versus its spectral count. The specificty of a prey is calculated as the fold change in the spectral count relative to the average across all other baits. Any other conditions/treatments for the query bait are ignored when calculating the average. Every other bait can contribute a single value when calculting the average, and this value is the maximum spectral count across any conditions present for that bait.

Orange points have infinite specificty. Hover over a point to see its label or click on a point to add a label to the plot.

Select a condition

Options

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Compare conditions

Compare the spectral counts between two different conditions. Any prey passing the option criteria for at least one bait will be displayed. Hover over a point to see its label or click on a point to add a label to the plot.

Select a pair of conditions

Options

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Preys

Condition legend
  • Ct: C-terminal tag
  • Nt: N-terminal tag
  • SC: spectral counts, calculated as the average spectral count between replicates minus the average detect in controls
  • Spec: specificity, calculated as the fold enrichment of a prey relative to all other bait proteins
  • FDR: false discovery rate
Prey
ID (Entrez / UniProt)ConditionsProfile
C-terminal tag (Ct)N-terminal tag (Nt)
S.C.
Spec.
FDR
S.C.
Spec.
FDR
UPF15976 / Q9290082.6717.540.58149.6731.760.01
FAM120A23196 / Q9NZB263.4294.12071.92106.730
G3BP110146 / Q1328355.9235.15090.4256.840
STAU227067 / Q9NUL346.1723.990.2666.6734.650
PRRC2A7916 / P486344516.71052.519.50
USP109100 / Q1469433.0821.04056.0835.670
ZCCHC385364 / Q9NUD525.3327.27034.8337.50
CAVIN1284119 / Q6NZI223.4230.66021.9228.70
MEIOC284071 / A2RUB121.755.350.0120.254.980.03
DHX5790957 / Q6P15821.6717.970.1647.6739.520
IGF2BP110642 / Q9NZI819.25Infinity025.75Infinity0
TUT779670 / Q5VYS818.3339.220.0127.3358.480
CELF110658 / Q9287917.3310.57019.8312.090
G3BP29908 / Q9UN8617Infinity018.5Infinity0
YTHDF3253943 / Q7Z739179.710.2126.515.140
EIF5B9669 / O6084116.8313.140.1819.8315.480.01
IGF2BP310643 / O0042516.52860152600
SPATS2L26010 / Q9NUQ615.8333.41025.3353.460
BICC180114 / Q9H69414.513.460.0117.516.250
RC3H1149041 / Q5TC8214.519.330.0116.5220
SPATS265244 / Q86XZ414.0820.270.0114.5820.990.01
GSK3A2931 / P4984014Infinity018Infinity0
FXR18087 / P5111413.583.870.0127.087.730
PTBP39991 / O9575811.5812.350.2116.5817.680.01
EIF4ENIF156478 / Q9NRA811.255.42016.758.060
YTHDF154915 / Q9BYJ9117.940.011913.720
GSK3B2932 / P4984110.5Infinity020Infinity0
RC3H254542 / Q9HBD19.7521.130.0312.2526.540.01
EIF2AK25610 / P195259.1738.5807.1730.170
CCDC138165055 / Q96M899.082.840.018.082.530.02
FXR29513 / P511167.582.630.0113.584.720
ABCF123 / Q8NE717.514.440.2915.529.850.01
PRKRA8575 / O755696.75Infinity0.019.25Infinity0
TOP3B8940 / O959856.530.73015.573.270
TSPYL585453 / Q86VY46.5Infinity07Infinity0
NBPF10100132406 / Q6P3W66.5Infinity03.5Infinity0.04
CAVIN28436 / O958106Infinity05.5Infinity0
R3HDM222864 / Q9Y2K56Infinity05Infinity0
SECISBP279048 / Q96T215.1761.940.0210.17121.850.01
LSG155341 / Q9H0895.080.330.4520.581.320.01
SECISBP2L9728 / Q93073513005.51430
FAM120C54954 / Q9NX055Infinity010.5Infinity0
R3HDM123518 / Q150324.57807121.330
NBPF155672 / Q3BBV04.5Infinity0.0412.5Infinity0
OTUD454726 / Q018044.339.390.0111.3324.570
RNF109921 / Q8N5U6412.2405.516.820
RUNDC1146923 / Q96C344207.53.750
NFX14799 / Q129864Infinity010.5Infinity0
DRG14733 / Q9Y2953.8311.080.01---
C17orf97400566 / Q6ZQX73.7520.530.025.2528.740.01
DDX60L91351 / Q5H9U93.6740.2213.1714.350
LSM14A26065 / Q8ND563.55.5204.57.090
RBM4754502 / A0AV963.338.250.0110.3325.60
DICER123405 / Q9UPY33.173.860.3514.6717.860.01
TRIM267726 / Q128993Infinity03.5Infinity0
PSMD85714 / P485563Infinity05Infinity0
TTC3164427 / Q49AM333904.558.50
FKBP32287 / Q006882.8324.610.023.8333.30.01
SRPK26733 / P783622.5Infinity06.5Infinity0
TUT423318 / Q5TAX32.516.250532.50
RPL7A6130 / P6242420.230.197.50.880.01
SKAP28935 / O7556326.50---
IFT7480173 / Q96LB322.670---
FMR12332 / Q0678724.520.056.514.70
LSM14B149986 / Q9BX401.831.920.164.334.530.01
FNDC3B64778 / Q53EP01.50.240.075.50.90
VAC1455697 / Q08AM61.52.60.0735.20
DNAJC21134218 / Q5F1R61260.171820
STXBP26813 / Q158331Infinity0.12.5Infinity0
NEMF9147 / O6052410.580.14.52.630
TTC47268 / O9580110.550.16.53.60
TRIM374591 / O949720.831.380.1811.8319.670
CDC168881 / Q130420.580.880.246.589.930.01
RPL296159 / P47914---3.56.280
RPL149045 / P50914---4.172.360.01
IQCE23288 / Q6IPM2---3Infinity0
PACSIN211252 / Q9UNF0---3.33Infinity0.01
POLE5426 / Q07864---3.516.550
PAIP110605 / Q9H074---412.240
ZFP36L2678 / P47974---3.5Infinity0
DHX3022907 / Q7L2E3---2132.120
TOGARAM123116 / Q9Y4F4---4.7529.060.01
TRIM5681844 / Q9BRZ2---48.320
CEP9590799 / Q96GE4---3.516.550
ECD11319 / O95905---6.7512.10.01
GRSF12926 / Q12849---35.6711.660
RPL216144 / P46778---2.50.490
SASH123328 / O94885---2260
FASTKD222868 / Q9NYY8---3.55.060
NF14763 / P21359---4.1711.60.01